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r, python-rpy2: moved from core to desktop, FS#1331
This commit is contained in:
Neofytos Kolokotronis
parent
d1e70ef756
commit
c792c89831
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# $Id$
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# Maintainer: Antonio Rojas <arojas@archlinux.org>
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# Contributor: Oliver Sherouse <oliver DOT sherouse AT gmail DOT com>
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# Contributor: David Scholl <djscholl@gmail.com>
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# Contributor: David Pretty <david.pretty@gmail.com>
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pkgbase=python-rpy2
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pkgname=('python2-rpy2' 'python3-rpy2')
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pkgver=2.5.6
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pkgrel=1
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pkgdesc="A very simple, yet robust, Python interface to the R Programming Language."
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arch=('i686' 'x86_64')
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url="http://rpy.sourceforge.net/"
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license=('MPL' 'GPL' 'LGPL')
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makedepends=('python3-setuptools' 'python2-setuptools' 'python3-numpy' 'python2-numpy' 'r')
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source=("http://pypi.python.org/packages/source/r/rpy2/rpy2-$pkgver.tar.gz")
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md5sums=('a36e758b633ce6aec6a5f450bfee980f')
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prepare() {
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cd rpy2-$pkgver
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sed -i "s:Rlapack:lapack:" setup.py
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sed -i "s:os.path.join(RHOME.strip(), 'include'):'/usr/include/R':" setup.py
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sed -i "s:os.path.join(RHOME.strip(), 'include'):'/usr/include/R':" setup.py
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}
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package_python2-rpy2() {
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depends=('python2-numpy' 'r' 'python2-singledispatch')
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cd rpy2-$pkgver
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python2 setup.py install --prefix=/usr --root="$pkgdir" --optimize=1
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sed -e 's|#!/usr/bin/env python|#!/usr/bin/env python2|' -i "$pkgdir"/usr/lib/python2.7/site-packages/rpy2/tests.py
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}
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package_python3-rpy2() {
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depends=('python3-numpy' 'r')
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cd rpy2-$pkgver
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python3 setup.py install --prefix=/usr --root="$pkgdir" --optimize=1
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}
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86
r/PKGBUILD
86
r/PKGBUILD
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# Maintainer: Manuel Tortosa <manutortosa[at]chakra-project[dot]org>
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pkgname=r
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pkgver=3.1.2
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pkgrel=1
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pkgdesc="Language and environment for statistical computing and graphics"
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arch=('x86_64')
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license=('GPL')
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url=('http://www.r-project.org/')
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depends=('atlas-lapack' 'bzip2' 'libpng' 'libjpeg' 'libtiff'
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'ncurses' 'pcre' 'readline' 'zlib' 'perl' 'gcc-libs'
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'libxt' 'libxmu' 'pango' 'xz' 'desktop-file-utils')
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makedepends=('openjdk' 'tk' 'gcc-fortran')
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backup=('etc/R/Makeconf' 'etc/R/Renviron' 'etc/R/ldpaths' 'etc/R/repositories' 'etc/R/javaconf')
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options=('!makeflags' '!emptydirs')
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source=("http://cran.r-project.org/src/base/R-${pkgver%%.*}/R-${pkgver}.tar.gz"
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'r.desktop'
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'r.png'
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'R.conf')
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sha1sums=('93809368e5735a630611633ac1fa99010020c5d6'
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'13aa29219bcaa102e575de8c1c8e0833d233e836'
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'a69a07ec363440efc18ce0a7f2af103375dea978'
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'43668da6cfd1b4455a99f23e79e2059294dddac9')
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prepare() {
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cd R-${pkgver}
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# set texmf dir correctly in makefile
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sed -i 's|$(rsharedir)/texmf|${datarootdir}/texmf|' share/Makefile.in
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# fix for texinfo 5.X
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# sed -i 's|test ${makeinfo_version_min} -lt 7|test ${makeinfo_version_min} -lt 0|' configure
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}
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build() {
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cd R-${pkgver}
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./configure --prefix=/usr \
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--libdir=/usr/lib \
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--sysconfdir=/etc/R \
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--datarootdir=/usr/share \
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rsharedir=/usr/share/R/ \
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rincludedir=/usr/include/R/ \
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rdocdir=/usr/share/doc/R/ \
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--with-x \
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--enable-R-shlib \
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--with-lapack \
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--with-blas \
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F77=gfortran \
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LIBnn=lib
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make
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# make libRmath.so
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cd src/nmath/standalone
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make shared
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}
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package() {
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cd R-${pkgver}
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make DESTDIR="${pkgdir}" install
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cd src/nmath/standalone
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make DESTDIR="${pkgdir}" install
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# Fixup R wrapper scripts.
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sed -i "s|${pkgdir} ||" "${pkgdir}/usr/bin/R"
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rm "${pkgdir}/usr/lib/R/bin/R"
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cd "${pkgdir}/usr/lib/R/bin"
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ln -s ../../../bin/R
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# install some freedesktop.org compatibility
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install -Dm644 "${srcdir}/r.desktop" \
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"${pkgdir}/usr/share/applications/r.desktop"
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install -Dm644 "${srcdir}/r.png" \
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"${pkgdir}/usr/share/pixmaps/r.png"
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# move the config directory to /etc and create symlinks
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install -d "${pkgdir}/etc/R"
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cd "${pkgdir}/usr/lib/R/etc"
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for i in *; do
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mv -f ${i} "${pkgdir}/etc/R"
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ln -s /etc/R/${i} ${i}
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done
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# Install ld.so.conf.d file to ensure other applications access the shared lib
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install -Dm644 "${srcdir}/R.conf" "${pkgdir}/etc/ld.so.conf.d/R.conf"
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}
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11
r/r.desktop
11
r/r.desktop
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[Desktop Entry]
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Name=R
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GenericName=environment for statistical computing
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Comment=language and environment for statistical computing and graphics
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Exec=R
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Icon=/usr/share/pixmaps/r.png
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DocPath=/usr/lib/R/doc/html/index.html
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StartupNotify=true
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Terminal=true
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Type=Application
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Categories=Education;Science;Math;
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15
r/r.install
15
r/r.install
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post_install() {
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update-desktop-database -q
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if [[ -x /usr/bin/mktexlsr ]]; then
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echo ">>> updating the filename database for texlive..."
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mktexlsr --quiet usr/share/texmf
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fi
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}
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post_upgrade() {
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post_install
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}
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post_remove() {
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post_install
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}
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