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[skip-ci] med: update to 3.3.1
This commit is contained in:
Francesco Marinucci
parent
0319400aea
commit
d7e34e0895
52
med/PKGBUILD
52
med/PKGBUILD
@ -1,10 +1,10 @@
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# Contributor: Oliver Goethel <deezy>
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pkgname=med
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pkgver=3.2.1
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pkgver=3.3.1
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pkgrel=1
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pkgdesc="MED stands for Modelisation et Echanges de Donnees, i.e. Data Modelization and Exchanges - MED is code-aster exchange module linked to hdf5"
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url="http://www.code-aster.org/outils/med/"
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url="https://www.salome-platform.org/downloads"
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license=('LGPL')
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depends=('hdf5' 'openmpi' 'swig')
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makedepends=('gcc-fortran' 'coreutils' 'python2')
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@ -15,16 +15,16 @@ replaces=('med_fichier')
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backup=()
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arch=('x86_64')
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source=("http://files.salome-platform.org/Salome/other/${pkgname}-${pkgver}.tar.gz"
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"patch-include_2.3.6_med.h.in"
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"patch-include_med.h.in"
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"patch-src_2.3.6_ci_MEDequivInfo.c"
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"patch-int2long")
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md5sums=('4965899bb578229ba27c9bc5293c651e'
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'b83949326d7ae0ca77a06822b754a329'
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'14a151cea108388d7a3b4c62887169f6'
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'8f0cbf6f08783a6ba68ff5ab240dd62e'
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'be65d145b85ed5b19a709d9dee84b6d2')
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"hdf5-1.10-support.patch")
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md5sums=('4981a02fa50b1a487a022804512631ff'
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'8fe2bc9bc5e6756351e1ff80e613dba3')
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prepare() {
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cd "$pkgname-$pkgver"_SRC
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patch -p1 -i ../hdf5-1.10-support.patch
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autoreconf -i
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}
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build() {
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export FFLAGS="-fopenmp -fPIC -fdefault-double-8 -fdefault-integer-8 -fdefault-real-8 -ffixed-line-length-0 ${CFLAGS}"
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export FCFLAGS="-fopenmp -fPIC -fdefault-double-8 -fdefault-integer-8 -fdefault-real-8 -ffixed-line-length-0 ${CFLAGS}"
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@ -34,30 +34,16 @@ build() {
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export PYTHON="$(which python2)"
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cd ${srcdir}/${pkgname}-${pkgver} || return 1
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# patch H5public_extract.h.in
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sed -i -e '/^#typedef/ s/#/\/\//' ./include/H5public_extract.h.in
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#patch for hdf5-1.10
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patch -p0 < ${srcdir}/patch-include_2.3.6_med.h.in
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patch -p0 < ${srcdir}/patch-include_med.h.in
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patch -p0 < ${srcdir}/patch-src_2.3.6_ci_MEDequivInfo.c
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patch -p0 < ${srcdir}/patch-int2long
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./configure --with-f90=mpif90 --prefix=/usr --datadir=/usr/share/med --with-swig=yes || return 1
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make || return 1
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cd "${pkgname}-${pkgver}"_SRC
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./configure --with-f90=mpif90 --prefix=/usr --datadir=/usr/share/med --with-swig=yes
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make
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}
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package() {
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cd ${srcdir}/${pkgname}-${pkgver} || return 1
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cd "${pkgname}-${pkgver}"_SRC
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make DESTDIR=${pkgdir} install || return 1
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# now move the testprograms to share, we don't want all the stuff in the bindir
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cp -dpr --no-preserve=ownership ${pkgdir}/usr/bin/testc ${pkgdir}/usr/share/med/testc
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cp -dpr --no-preserve=ownership ${pkgdir}/usr/bin/testf ${pkgdir}/usr/share/med/
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cp -dpr --no-preserve=ownership ${pkgdir}/usr/bin/unittests ${pkgdir}/usr/share/med/
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cp -dpr --no-preserve=ownership ${pkgdir}/usr/bin/usescases ${pkgdir}/usr/share/med/
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rm -r ${pkgdir}/usr/bin/{usescases,unittests,testf,testc}
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make DESTDIR=${pkgdir} install
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}
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7565
med/hdf5-1.10-support.patch
Normal file
7565
med/hdf5-1.10-support.patch
Normal file
File diff suppressed because it is too large
Load Diff
@ -1,14 +0,0 @@
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--- include/2.3.6/med.h.in.orig 2014-10-09 08:12:57 UTC
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+++ include/2.3.6/med.h.in
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@@ -25,11 +25,7 @@ extern "C" {
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#endif
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#define HDF5_VERSION (H5_VERS_MAJOR * 10000 + H5_VERS_MINOR * 100 + H5_VERS_RELEASE )
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-#if HDF5_VERSION < 10607
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-#define HDF5_SELECT_BUG (const hsize_t **)
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-#else
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#define HDF5_SELECT_BUG
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-#endif
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#define MED_NUM_MAJEUR 2
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@ -1,15 +0,0 @@
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--- include/med.h.in.orig 2014-10-09 08:12:57 UTC
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+++ include/med.h.in
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@@ -27,12 +27,7 @@ extern "C" {
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#define HDF5_VERSION (H5_VERS_MAJOR * 10000 + H5_VERS_MINOR * 100 + H5_VERS_RELEASE )
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-#if HDF5_VERSION < 10607
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-/*TODO : A enlever après MAJ complète api hdf5-1.8 */
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-#define HDF5_SELECT_BUG (const hsize_t **)
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-#else
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#define HDF5_SELECT_BUG
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-#endif
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/*Le symbole H5F_LIBVER_18 n'existe pas dans hdf5-1.8.4 (uniquement à partir de la version 1.8.6)
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Pour rester dans le modèle interne hdf introduit en 1.8 quelque soit les futurs modèles internes hdf
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@ -1,108 +0,0 @@
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diff -Nur src.orig/2.3.6/hdfi/MEDattrNumEcrire.c src/2.3.6/hdfi/MEDattrNumEcrire.c
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--- src.orig/2.3.6/hdfi/MEDattrNumEcrire.c 2015-09-07 18:55:34.000000000 +0200
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+++ src/2.3.6/hdfi/MEDattrNumEcrire.c 2016-05-24 02:15:27.450098778 +0200
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@@ -36,7 +36,7 @@
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{
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med_idt aid,attr;
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med_err ret;
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- int type_hdf;
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+ long type_hdf;
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med_mode_acces MED_MODE_ACCES;
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if ( (MED_MODE_ACCES = _MEDmodeAcces(pere) ) == MED_UNDEF_MODE_ACCES ) {
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diff -Nur src.orig/hdfi/_MEDattributeNumRdByName.c src/hdfi/_MEDattributeNumRdByName.c
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--- src.orig/hdfi/_MEDattributeNumRdByName.c 2015-09-07 18:55:16.000000000 +0200
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+++ src/hdfi/_MEDattributeNumRdByName.c 2016-05-24 02:15:27.443432111 +0200
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@@ -27,7 +27,7 @@
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{
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med_idt _attid=0;
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med_err _ret=-1;
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- int type_hdf;
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+ long type_hdf;
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switch(type)
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{
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diff -Nur src.orig/hdfi/_MEDattributeNumWrByName.c src/hdfi/_MEDattributeNumWrByName.c
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--- src.orig/hdfi/_MEDattributeNumWrByName.c 2015-09-07 18:55:17.000000000 +0200
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+++ src/hdfi/_MEDattributeNumWrByName.c 2016-05-24 02:15:27.443432111 +0200
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@@ -32,7 +32,7 @@
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{
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med_idt _attid=0,aid=0;
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med_err _ret=-1;
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- int type_hdf;
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+ long type_hdf;
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med_access_mode MED_ACCESS_MODE;
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H5O_info_t _oinfo;
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diff -Nur src.orig/hdfi/_MEDattributeNumWr.c src/hdfi/_MEDattributeNumWr.c
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--- src.orig/hdfi/_MEDattributeNumWr.c 2015-09-07 18:55:16.000000000 +0200
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+++ src/hdfi/_MEDattributeNumWr.c 2016-05-24 02:15:27.443432111 +0200
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@@ -32,7 +32,7 @@
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{
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med_idt _attid=0,aid=0;
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med_err _ret=-1;
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- int type_hdf;
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+ long type_hdf;
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med_access_mode MED_ACCESS_MODE;
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H5O_info_t _oinfo;
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diff -Nur src.orig/hdfi/_MEDattributeStringRdByName.c src/hdfi/_MEDattributeStringRdByName.c
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--- src.orig/hdfi/_MEDattributeStringRdByName.c 2015-09-07 18:55:15.000000000 +0200
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+++ src/hdfi/_MEDattributeStringRdByName.c 2016-05-24 02:15:27.443432111 +0200
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@@ -29,7 +29,7 @@
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{
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med_err _ret=-1;
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med_idt _attid=0;
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- int type_hdf=0;
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+ long type_hdf=0;
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if ( (type_hdf = H5Tcopy(H5T_C_S1)) < 0) {
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MED_ERR_(_ret,MED_ERR_CREATE,MED_ERR_HDFTYPE, MED_ERR_NAME_MSG );
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diff -Nur src.orig/hdfi/_MEDattributeStringWrByName.c src/hdfi/_MEDattributeStringWrByName.c
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--- src.orig/hdfi/_MEDattributeStringWrByName.c 2015-09-07 18:55:16.000000000 +0200
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+++ src/hdfi/_MEDattributeStringWrByName.c 2016-05-24 02:15:27.443432111 +0200
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@@ -31,7 +31,7 @@
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med_access_mode MED_ACCESS_MODE;
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med_idt _attid=0,aid=0;
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med_err _ret=-1;
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- int type_hdf=0;
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+ long type_hdf=0;
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med_bool _attmustbecreated= MED_FALSE;
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hsize_t _attsize=0;
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med_size _valsize=0;
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diff -Nur src.orig/hdfi/_MEDattributeStringWr.c src/hdfi/_MEDattributeStringWr.c
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--- src.orig/hdfi/_MEDattributeStringWr.c 2015-09-07 18:55:17.000000000 +0200
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+++ src/hdfi/_MEDattributeStringWr.c 2016-05-24 02:15:27.443432111 +0200
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@@ -30,7 +30,7 @@
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med_access_mode MED_ACCESS_MODE;
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med_idt _attid=0,aid=0;
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med_err _ret=-1;
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- int type_hdf=0;
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+ long type_hdf=0;
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med_bool _attmustbecreated= MED_FALSE;
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hsize_t _attsize=0;
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med_size _valsize=0;
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diff -Nur src.orig/hdfi/_MEDdatasetRd.c src/hdfi/_MEDdatasetRd.c
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--- src.orig/hdfi/_MEDdatasetRd.c 2015-09-07 18:55:15.000000000 +0200
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+++ src/hdfi/_MEDdatasetRd.c 2016-05-24 02:15:27.443432111 +0200
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@@ -32,7 +32,7 @@
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med_idt _dataset=0, _dataspace=0;
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med_size _datasetsize[1]={0};
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med_err _ret=-1;
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- int _hdftype=0;
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+ long _hdftype=0;
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int _datasetsizeEqualTosizespace = 0;
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med_access_mode _MED_ACCESS_MODE;
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med_int _nvaluesperentity=0,_nconstituentpervalue=0;
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diff -Nur src.orig/hdfi/_MEDdatasetWr.c src/hdfi/_MEDdatasetWr.c
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--- src.orig/hdfi/_MEDdatasetWr.c 2015-09-07 18:55:15.000000000 +0200
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+++ src/hdfi/_MEDdatasetWr.c 2016-05-24 02:15:27.443432111 +0200
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@@ -30,7 +30,7 @@
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med_idt _dataset=0, _dataspace=0,_datadiskspace=0;
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med_size _datasetsize[1]={0};
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med_err _ret=-1;
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- int _hdftype=0;
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+ long _hdftype=0;
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int _datasetsizeEqualTosizespace = 0;
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med_access_mode _MED_ACCESS_MODE;
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med_int _nvaluesperentity=0,_nconstituentpervalue=0;
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@ -1,11 +0,0 @@
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--- src/2.3.6/ci/MEDequivInfo.c.orig 2014-10-09 08:12:59 UTC
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+++ src/2.3.6/ci/MEDequivInfo.c
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@@ -24,7 +24,7 @@
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#include <stdlib.h>
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int
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-MEDequivInfo(int fid, char *maa, int ind, char *eq, char *des)
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+MEDequivInfo(med_idt fid, char *maa, int ind, char *eq, char *des)
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{
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med_idt eqid;
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med_err ret;
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